BCL2L13


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BCL2-like 13 (apoptosis facilitator), also known as BCL2L13 or Bcl-rambo, is a protein which in humans is encoded by the BCL2L13 gene on chromosome 22. This gene encodes a mitochondrially-localized protein which is classified under the Bcl-2 protein family. Overexpression of the encoded protein results in apoptosis.[5][6] As a result, it has been implicated in cancers such as childhood acute lymphoblastic leukemia (ALL) and glioblastoma multiforme (GBM).[7][8] Alternatively spliced transcript variants have been observed for this gene, such as Bcl-rambo beta.[5][9]

BCL2L13
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2IPD

Identifiers
AliasesBCL2L13, BCL-RAMBO, Bcl2-L-13, MIL1, BCL2 like 13
External IDsMGI: 2136959; HomoloGene: 9111; GeneCards: BCL2L13; OMA:BCL2L13 - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)[1]

Chromosome 22 (human)

Genomic location for BCL2L13

Genomic location for BCL2L13

Band22q11.21Start17,628,855 bp[1]
End17,730,855 bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]

Chromosome 6 (mouse)

Genomic location for BCL2L13

Genomic location for BCL2L13

Band6 F1|6 57.01 cMStart120,813,173 bp[2]
End120,869,803 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • gastrocnemius muscle

  • middle temporal gyrus

  • muscle of thigh

  • glutes

  • Skeletal muscle tissue of rectus abdominis

  • islet of Langerhans

  • Brodmann area 23

  • tibialis anterior muscle

  • deltoid muscle
Top expressed in
  • corneal stroma

  • lens

  • muscle of thigh

  • plantaris muscle

  • epithelium of lens

  • soleus muscle

  • digastric muscle

  • triceps brachii muscle

  • yolk sac

  • extensor digitorum longus muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23786

94044

Ensembl

ENSG00000099968

ENSMUSG00000009112

UniProt

Q9BXK5

P59017

RefSeq (mRNA)
NM_001270726
NM_001270727
NM_001270728
NM_001270729
NM_001270730

NM_001270731
NM_001270732
NM_001270733
NM_001270734
NM_001270735
NM_015367
NM_001363824

NM_153516

RefSeq (protein)
NP_001257655
NP_001257656
NP_001257657
NP_001257658
NP_001257659

NP_001257660
NP_001257661
NP_001257662
NP_001257663
NP_001257664
NP_056182
NP_001350753

NP_705736

Location (UCSC)Chr 22: 17.63 – 17.73 MbChr 6: 120.81 – 120.87 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

As a member of the Bcl-2 protein family, Bcl-rambo comprises four conserved BH domains and a transmembrane (TM) domain. However, unlike the other members, Bcl-rambo does not require the BH domains for its apoptotic function, relying instead on the mitochondrial localization carried out by the TM domain. In addition to these domains, it has conserved B-cell lymphoma 2 homology motifs, as well as an extension at its c-terminal, termed the BHNo domain, which contains two tandem repeats, RTA and RTB.[5][9]

An alternatively-spliced protein variant, called Bcl-rambo beta, is composed of only the BH4 domain, completely lacking the BH domains 1 through 3 due to an in-frame stop codon inserted by an Alu element. Without the TM domain, this variant remains in the cytosol and does not localize to the mitochondria. Nonetheless, it still performs proapoptotic activity, mediated by the encoded Alu element, though the exact mechanisms remain to be elucidated.[10]

Bcl-rambo is a member of the Bcl-2 family of proteins that regulate apoptosis. In cells, Bcl-rambo is localized to the mitochondria, and its overexpression induces apoptosis that is blocked by caspase inhibitors, whereas inhibitors controlling upstream events of either the 'death receptor' (FLIP, FADD-DN) or the 'mitochondrial' pro-apoptotic pathway (Bcl-x(L)) had no effect.[6] Bcl-rambo mediates apoptosis by associating with adenine nucleotide translocator (ANT), a component of the mitochondrial permeability transition pore, to induce its opening. ANT will also facilitate the transfer of ADP and ATP between the cytosol and the matrix.[9]

Clinical significance

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The BCL2L13 gene has been implicated in a wide spectrum of cancers. Previous clinical studies observed in ALL patients that high expression of BCL2L13 correlated to lower event-free and overall survival. Though statistically significant, the observations contradict the accepted pro-apoptotic function of BCL2L13’s gene product, which should have contributed to cancer cell death and, thus, more favorable survival outcomes. Two possible explanations propose that either 1) Bcl-rambo performs a different biological role in childhood, or 2) alternative splicing could have generated an anti-apoptotic variant. More research is necessary to resolve this discrepancy.[7] In another type of cancer, GBM, Bcl-rambo is known to inhibit induced apoptosis in GBM cells by binding two other pro-apoptotic proteins, ceramide synthases 2 (CerS2) and 6 (CerS6), thereby blocking CerS2/6 complex formation and activity. Thus, inhibiting BCL2L13 during cancer treatments may improve survival outcomes.[8]

BCL2L13 has been shown to interact with:

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000099968Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000009112Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b c "Entrez Gene: BCL2L13 BCL2-like 13 (apoptosis facilitator)".
  6. ^ a b Kataoka T, Holler N, Micheau O, Martinon F, Tinel A, Hofmann K, Tschopp J (Jun 2001). "Bcl-rambo, a novel Bcl-2 homologue that induces apoptosis via its unique C-terminal extension". The Journal of Biological Chemistry. 276 (22): 19548–54. doi:10.1074/jbc.M010520200. PMID 11262395.
  7. ^ a b Yang YL, Lin SR, Chen JS, Lin SW, Yu SL, Chen HY, Yen CT, Lin CY, Lin JF, Lin KH, Jou ST, Hu CY, Chang SK, Lu MY, Chang HH, Chang WH, Lin KS, Lin DT (Jan 2010). "Expression and prognostic significance of the apoptotic genes BCL2L13, Livin, and CASP8AP2 in childhood acute lymphoblastic leukemia" (PDF). Leukemia Research. 34 (1): 18–23. doi:10.1016/j.leukres.2009.07.023. PMID 20109966.
  8. ^ a b c d Jensen SA, Calvert AE, Volpert G, Kouri FM, Hurley LA, Luciano JP, Wu Y, Chalastanis A, Futerman AH, Stegh AH (Apr 2014). "Bcl2L13 is a ceramide synthase inhibitor in glioblastoma". Proceedings of the National Academy of Sciences of the United States of America. 111 (15): 5682–7. Bibcode:2014PNAS..111.5682J. doi:10.1073/pnas.1316700111. PMC 3992626. PMID 24706805.
  9. ^ a b c Kim JY, So KJ, Lee S, Park JH (Sep 2012). "Bcl-rambo induces apoptosis via interaction with the adenine nucleotide translocator". FEBS Letters. 586 (19): 3142–9. doi:10.1016/j.febslet.2012.08.015. PMID 22921587. S2CID 31709574.
  10. ^ * Yi P, Zhang W, Zhai Z, Miao L, Wang Y, Wu M (Jan 2003). "Bcl-rambo beta, a special splicing variant with an insertion of an Alu-like cassette, promotes etoposide- and Taxol-induced cell death". FEBS Letters. 534 (1–3): 61–8. doi:10.1016/S0014-5793(02)03778-X. PMID 12527362. S2CID 7018829.